Shortcuts to body

이전 사이트 이동 logo

LOGIN JOIN
KPOP Search
검색폼

Go Back
단백체 데이터
KoBMAP_Mouse Heart Proteomics workflow comparison_Global_DIA
  • Accession
    KPX10000258
  • Submission date
    2025-12-03
  • Metadata export
    XML Download
Project Detail
Dataset detail - Dataset Tilte, Species, Sample type, Disease, Offline, SCX, 16 fractions, Trypsin, Quantification, Modifications, Experiment type, MS instrument, Experimental protocol, Data analysis protocol
BioProject
 KAP241926
ProjectTitle
 Mouse heart proteomics workflow comparison for KoBMAP project
Description
 To establish optimal analytical conditions for high-quality data generation, mouse heart tissue was used to evaluate different combinations of sample preparation and acquisition strategies. For global proteomics, In-solution, FASP, and S-trap digestion methods were assessed in combination with both DDA and DIA acquisition modes. For phosphoproteomics, TiO₂ and IMAC enrichment methods were evaluated together with DDA and DIA acquisition strategies.
Keywords
  
Submitter
 Kim Min-Sik , DGIST
Publication
Publication
PubMed ID DOI
   
Dataset Detail
Dataset detail - Description, Keywords, Principal investigato, Pubmed ID, Doi, Dataset Tilte, Species, Sample type, Disease, Offline, SCX, 16 fractions, Trypsin, Quantification, Modifications, Experiment type, MS instrument, Experimental protocol, Data analysis protocol
Dataset Title
 KoBMAP_Mouse Heart Proteomics workflow comparison_Global_DIA
Submission Type
 Complete
Species
 Mus musculus (Mouse)
Sample type
Sample type
Body fluid Tissue Cell Others
heart
Disease
Disease
Fractionation
Fractionation
Method Separation mode Number of fractions
Digestion
Quantification
Quantification
Labeling Labeling Child Plex
()
Modifications
Acetyl (Protein N-term), Carbamidomethyl (C)
Modifications
Bottom-up proteomics
MS instrument
Thermo Scientific Orbitrap Exploris 480
Sample processing protocol
Data analysis protocol
Search parameters
Supplementary information
 
Announce Date
 2025-12-02
Files Summary

Total 22 files 10,781,924,280 10,781,924,280

Files Summary
File type # Files Total Size
raw 9 9,880,678,530 9,880,678,530
searchResultFile 13 901,245,750 901,245,750
File
file 목록
File Name Size Type Published Download mzMl QC file
Mouse_heart_FASP_DIA_1.raw 906,520,478 906,520,478 raw 2025-12-02
Mouse_heart_FASP_DIA_2.raw 1,127,687,965 1,127,687,965 raw 2025-12-02
Mouse_heart_FASP_DIA_3.raw 985,966,635 985,966,635 raw 2025-12-02
Mouse_heart_Insol_DIA_1.raw 1,006,049,166 1,006,049,166 raw 2025-12-02
Mouse_heart_Insol_DIA_2.raw 1,011,653,605 1,011,653,605 raw 2025-12-02
Mouse_heart_Insol_DIA_3.raw 994,588,559 994,588,559 raw 2025-12-02
Mouse_heart_Strap_DIA_1.raw 1,275,895,034 1,275,895,034 raw 2025-12-02
Mouse_heart_Strap_DIA_2.raw 1,252,639,028 1,252,639,028 raw 2025-12-02
Mouse_heart_Strap_DIA_3.raw 1,319,678,060 1,319,678,060 raw 2025-12-02
report-first-pass.gg_matrix.tsv 525,913 525,913 tsv 2025-12-02
report-first-pass.pg_matrix.tsv 947,578 947,578 tsv 2025-12-02
report-first-pass.pr_matrix.tsv 15,736,005 15,736,005 tsv 2025-12-02
report-first-pass.stats.tsv 2,095 2,095 tsv 2025-12-02
report-first-pass.tsv 414,135,832 414,135,832 tsv 2025-12-02
report-first-pass.unique_genes_matrix.tsv 516,712 516,712 tsv 2025-12-02
report.gg_matrix.tsv 552,142 552,142 tsv 2025-12-02
report.log.txt 22,009 22,009 txt 2025-12-02
report.pg_matrix.tsv 973,926 973,926 tsv 2025-12-02
report.pr_matrix.tsv 16,340,946 16,340,946 tsv 2025-12-02
report.stats.tsv 2,114 2,114 tsv 2025-12-02
report.tsv 450,947,790 450,947,790 tsv 2025-12-02
report.unique_genes_matrix.tsv 542,688 542,688 tsv 2025-12-02