Experiment
KAE21051320
Experiment Title
Illumina NovaSeq 6000 paired-end Sequencing of KAS20000431
(DRX649300)
Common Fields
|
Organism
|
Homo sapiens | 9606 |
|---|---|
|
Submission date
|
2021-03-22 |
Accession
|
Runs
|
All runs [96] |
|---|---|
|
Experiments
|
All experiments [96] |
|
BioSamples
|
All samples [60] |
|
BioProject
|
KAP200004 |
Library
|
Library name
|
Hep3B_HiC_rep1_Hi-C
|
|---|---|
|
Instrument model
|
Illumina NovaSeq 6000
|
|
Strategy
|
RAD-Seq
|
|
Source
|
GENOMIC
|
|
Selection
|
other
|
|
Layout
|
paired
|
|
Construction protocol
|
Total 2,000,000 cells were crosslinked using 36.5% formaldehyde. In situ Hi-C was performed using the Arima-HiC kit Arima Genomics Inc and sequenced using a Illumina Novaseq 6000 150bp with the paired method.
|
| Run | File Name | Size | Type | Published | Download | |
|---|---|---|---|---|---|---|
| KRA: KAR21051320 , DRA: DRR669198 | READ_1.fq.gz | 26,985,764,932 26,985,764,932 | fastq | 2021-12-03 | ||
| KRA: KAR21051320 , DRA: DRR669198 | READ_2.fq.gz | 28,027,936,891 28,027,936,891 | fastq | 2021-12-03 |