BioProject
항생제 처리 시, staphylococcus aureus 의 metabolome 변화
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AccessionKAP240716
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Submission date2024-05-08
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Technique type
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Mass spectrometry (MS) |
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Assay Type
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Chromatography (MS-based) |
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Species
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Staphylococcus aureus |
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샘플 유형
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Microbe |
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추출 프로토콜
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HG003 was quenched by a mixture of methanol/acetonitrile/H2O (40:40:20). Then, metabolites were extracted by mechanical disruption with 0.07–0.1 mm glass beads using a tissue homogenizer. Lysates were filtered through a 0.2-μm microcentrifuge filter.
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크로마토그래피 프로토콜
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Extracted metabolites were separated using Cogent diamond hydride type C column. The gradient elution of metabolites was conducted using solvent A (DDW with 0.2% formic acid) and solvent B (acetonitrile with 0.2% formic acid). Detailed condition for gradient elution is as follows: 0–2 min, 85% B; 3–5 min, 80% B; 6–7 min, 75%; 8–9 min, 70% B; 10–11.1 min, 50% B; 11.1–14 min 20% B; 14.1–24 min 5% B followed by a 10 min re-equilibration time at a flow rate of 0.4 mL/min.
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질량분석 프로토콜
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LC-MS analysis for metabolic profiling was conducted using Agilent time-of-flight(TOF) mass spectrometry coupled with Agilent 1290 liquid chromatography system.
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프로젝트의 영문 제목
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Metabolic analysis of Staphylococcus aureus upon antibiotics treatment | ||||||||||||
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프로젝트의 국문 제목
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항생제 처리 시, staphylococcus aureus 의 metabolome 변화 | ||||||||||||
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프로젝트의 영문 설명
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Staphylococcus aureus is Gram-positive pathogen. In order to find antibiotics against staphylococcus aureus, metabolomics is used. We treat antibiotics with various known mechanisms to get metabolic profile of s. aureus upon antibiotics treatment. Metabolomics data is analyzed by LC-ToF-MS to discover the metabolic profile. | ||||||||||||
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프로젝트의 국문 설명
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Staphylocuccus aureus는, 대표적인 그람 양성 구균의 병원균으로, 이러한 staphylocuccus aureus를 표적으로 하는 항생물질을 찾기 위해, metabolomics기술을 이용하여, 새로운 항생물질의 표적을 찾고자 함. 그 방법으로, 기존에 알려진 여러 기작의 항생제를 처리하여, LC-ToF-MS로 분석하여 항생제의 작용기작 별, metabolic profile을 발굴함. | ||||||||||||
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Date and Organization
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Grant
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Publication and Patent
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| File Name | Size | Type | Published | Download | |
|---|---|---|---|---|---|
| Bacitracin17.d.zip | 35,282,477 35,282,477 | zip | 2025-06-30 | ||
| Bacitracin18.d.zip | 70,772,805 70,772,805 | zip | 2025-06-30 | ||
| Bithionol17.d.zip | 50,118,771 50,118,771 | zip | 2025-06-30 | ||
| Bithionol18.d.zip | 50,124,918 50,124,918 | zip | 2025-06-30 | ||
| Cefaclor17.d.zip | 25,033,197 25,033,197 | zip | 2025-06-30 | ||
| Cefaclor18.d.zip | 25,031,581 25,031,581 | zip | 2025-06-30 | ||
| Cefotaxime17.d.zip | 19,915,425 19,915,425 | zip | 2025-06-30 | ||
| Cefotaxime18.d.zip | 18,534,688 18,534,688 | zip | 2025-06-30 | ||
| Cephalothin17.d.zip | 21,035,045 21,035,045 | zip | 2025-06-30 | ||
| Cephalothin18.d.zip | 20,913,751 20,913,751 | zip | 2025-06-30 | ||
| Cerulenin17.d.zip | 34,245,431 34,245,431 | zip | 2025-06-30 | ||
| Cerulenin18.d.zip | 34,293,861 34,293,861 | zip | 2025-06-30 | ||
| Chloramphenicol17.d.zip | 38,696,309 38,696,309 | zip | 2025-06-30 | ||
| Chloramphenicol18.d.zip | 38,820,331 38,820,331 | zip | 2025-06-30 | ||
| Ciprofloxacin17.d.zip | 28,504,823 28,504,823 | zip | 2025-06-30 | ||
| Ciprofloxacin18.d.zip | 28,593,445 28,593,445 | zip | 2025-06-30 | ||
| Daptomycin17.d.zip | 13,396,154 13,396,154 | zip | 2025-06-30 | ||
| Daptomycin18.d.zip | 13,426,808 13,426,808 | zip | 2025-06-30 | ||
| Dcycloserine17.d.zip | 22,130,191 22,130,191 | zip | 2025-06-30 | ||
| Dcycloserine18.d.zip | 22,094,614 22,094,614 | zip | 2025-06-30 | ||
| Erythromycin17.d.zip | 29,189,331 29,189,331 | zip | 2025-06-30 | ||
| Erythromycin18.d.zip | 28,889,002 28,889,002 | zip | 2025-06-30 | ||
| Gentamicin17.d.zip | 24,621,018 24,621,018 | zip | 2025-06-30 | ||
| Gentamicin18.d.zip | 24,602,045 24,602,045 | zip | 2025-06-30 | ||
| Kanamycin17.d.zip | 17,092,154 17,092,154 | zip | 2025-06-30 | ||
| Kanamycin18.d.zip | 31,997,457 31,997,457 | zip | 2025-06-30 | ||
| Methicillin17.d.zip | 28,665,618 28,665,618 | zip | 2025-06-30 | ||
| Methicillin18.d.zip | 28,767,278 28,767,278 | zip | 2025-06-30 | ||
| Moenomycin17.d.zip | 27,105,980 27,105,980 | zip | 2025-06-30 | ||
| Moenomycin18.d.zip | 26,973,666 26,973,666 | zip | 2025-06-30 | ||
| Moxifloxacin17.d.zip | 34,404,198 34,404,198 | zip | 2025-06-30 | ||
| Moxifloxacin18.d.zip | 34,352,199 34,352,199 | zip | 2025-06-30 | ||
| Mupirocin17.d.zip | 74,490,836 74,490,836 | zip | 2025-06-30 | ||
| Mupirocin18.d.zip | 74,118,787 74,118,787 | zip | 2025-06-30 | ||
| Novobiocin17.d.zip | 48,725,626 48,725,626 | zip | 2025-06-30 | ||
| Novobiocin18.d.zip | 48,579,197 48,579,197 | zip | 2025-06-30 | ||
| Ofloxacin17.d.zip | 32,270,712 32,270,712 | zip | 2025-06-30 | ||
| Ofloxacin18.d.zip | 32,249,795 32,249,795 | zip | 2025-06-30 | ||
| Oxacillin17.d.zip | 18,229,819 18,229,819 | zip | 2025-06-30 | ||
| Oxacillin18.d.zip | 18,260,986 18,260,986 | zip | 2025-06-30 | ||
| Penicillin17.d.zip | 18,559,190 18,559,190 | zip | 2025-06-30 | ||
| Penicillin18.d.zip | 18,375,961 18,375,961 | zip | 2025-06-30 | ||
| Platensimycin17.d.zip | 70,293,580 70,293,580 | zip | 2025-06-30 | ||
| Platensimycin18.d.zip | 69,622,234 69,622,234 | zip | 2025-06-30 | ||
| Rifampicin17.d.zip | 29,982,385 29,982,385 | zip | 2025-06-30 | ||
| Rifampicin18.d.zip | 29,426,171 29,426,171 | zip | 2025-06-30 | ||
| Rifaximin17.d.zip | 51,308,572 51,308,572 | zip | 2025-06-30 | ||
| Rifaximin18.d.zip | 51,111,935 51,111,935 | zip | 2025-06-30 | ||
| Streptomycin17.d.zip | 23,903,965 23,903,965 | zip | 2025-06-30 | ||
| Streptomycin18.d.zip | 23,655,368 23,655,368 | zip | 2025-06-30 | ||
| sulfamethoxazole17.d.zip | 29,358,422 29,358,422 | zip | 2025-06-30 | ||
| sulfamethoxazole18.d.zip | 29,306,103 29,306,103 | zip | 2025-06-30 | ||
| sulfisoxazole17.d.zip | 28,194,560 28,194,560 | zip | 2025-06-30 | ||
| sulfisoxazole18.d.zip | 28,639,855 28,639,855 | zip | 2025-06-30 | ||
| thiolutin17.d.zip | 40,910,000 40,910,000 | zip | 2025-06-30 | ||
| Thiolutin18.d.zip | 40,793,063 40,793,063 | zip | 2025-06-30 | ||
| Triclosan14.d.zip | 15,022,891 15,022,891 | zip | 2025-06-30 | ||
| Triclosan15.d.zip | 15,103,013 15,103,013 | zip | 2025-06-30 | ||
| Trimethoprim17.d.zip | 18,584,941 18,584,941 | zip | 2025-06-30 | ||
| Trimethoprim18.d.zip | 18,495,974 18,495,974 | zip | 2025-06-30 | ||
| Vancomycin17.d.zip | 13,699,162 13,699,162 | zip | 2025-06-30 | ||
| Vancomycin18.d.zip | 13,730,864 13,730,864 | zip | 2025-06-30 |
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