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Run
KAR24062609
Experiment Title
Illumina HiSeq 2500 paired-end Sequencing of PDAC05_PDX
Common Fields
Common Fields - BioProject, Data Type, Submission date, Access, Release date, Runs
Experiment
Accession KAE24062609
library name PDAC05_PDX_RNA-Seq
platform ILLUMINA
strategy RNA-Seq
source TRANSCRIPTOMIC
selection CAGE
layout paired
BioSample
Accession KAS24087741
Sample name PDAC05_PDX
Organism Homo sapiens
BioProject
Accession KAP240672
Project title Defining and tracing subtypes of patient-derived xenograft models in pancreatic ductal adenocarcinoma
Run Metadata
Primary
(1 cases)
Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
file type
location
file name
bytes
total sequences (bp)
sequence lengh (bp) Release date Access type
fastq KHBDB
PDAC05_R_PDX_R1.fastq.gz | PDAC05_R_PDX_R2.fastq.gz
13,586,213,201 13,586,213,201 2024-03-20 CONTROL_PUBLIC
library_construction_protocol
RNA sequencing library was constructed using TruSeq Stranded Total RNA H/M/R prep kit.
Analysis
(0 cases)
Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
analysis type
file type
location
File name
bytes
Release date Access type
No Run data.
Reference
(0 cases)
Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
reference type RefSeq accession ID File name
No Run data.