Shortcuts to body

이전 사이트 이동 logo

LOGIN JOIN
KRA Search
검색폼

Go Back
Run
KAR21051330
Experiment Title
Illumina NovaSeq 6000 paired Sequencing of KAS20000432 (PRJDB19217)
Common Fields
Common Fields - BioProject, Data Type, Submission date, Access, Release date, Runs
Experiment
Accession KAE21051330
라이브러리 name Hep3B_HiC_rep2_Hi-C
플랫폼 ILLUMINA
시퀀싱 기법 RAD-Seq
라이브러리 출처 GENOMIC
라이브러리 선택 방법 other
라이브러리 레이아웃 paired
BioSample
Accession KAS20000432
샘플명 Hep3B_HiC_rep2
생명체 명 Homo sapiens
BioProject
Accession KAP200004
프로젝트의 영문 제목 Discovery of 3D-nucleome biomarker in liver/breast cancer patients
Run Metadata
Primary
(1 cases)
Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
file type
location
file name
bytes
total sequences (bp)
sequence lengh (bp) Release date Access type
fastq KBDS-KRA
READ_1.fq.gz | READ_2.fq.gz
79,925,453,671 79,925,453,671 2021-12-03 PUBLIC
library_construction_protocol
Total 2,000,000 cells were crosslinked using 36.5% formaldehyde. In situ Hi-C was performed using the Arima-HiC kit Arima Genomics Inc and sequenced using a Illumina Novaseq 6000 150bp with the paired method.
Analysis
(0 cases)
Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
analysis type
file type
location
File name
bytes
Release date Access type
No Run data.
Reference
(0 cases)
Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
reference type RefSeq accession ID File name
No Run data.