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Study Identification of mechanisms of HBV- and HCV-induced Hepatocellular carcinoma via single cell RNA sequencing
Study Information
Accession
 SCS2204600
Date and Organization
Processed date 2025-12-31
Oranization Korea Research Institute of Bioscience and Biotechnology
Publication
PubMed ID of publication
DOI of publication
Conditions
Species
Scientific Name Homo sapiens
Taxonomy ID 9606
Tissue
 Liver
Treatment
 -
Sex
 -
Cell Line
 -
Age
 -
Cell Type
 Tumor tissue
Development Stage
 -
Cell Subtype
Disease
 Liver cancer
Isolate
 Sample extraction was prepared using Chromium Single cell 3', Reagent Kits v3 (10X Genomics) according to the manufacturer?梨?찓_ protocols.
Disease Stage
 -
Genotype
 -
Helath State
 -
Associated K-BDS/scDB
BioProject
 KAP220460
scDB Study
 N/A
BioSample
 All samples [5]
scDB Data
 All Data [5]
KRA
 All experiments [5]
Cell Browser
Cell Browse
Cell Browser
Cell Browser
Cell-cell interaction
Scatter plot
File
file 목록
File Name Size Type Published Download
SCS2201561_celltype_B cell_DEG_wilcoxon.csv 3,694,634 3,694,634 csv
SCS2201561_celltype_Dendritic cell_DEG_wilcoxon.csv 3,986,636 3,986,636 csv
SCS2201561_celltype_Endothelial cell_DEG_wilcoxon.csv 3,966,786 3,966,786 csv
SCS2201561_celltype_Erythrocyte_DEG_wilcoxon.csv 3,887,340 3,887,340 csv
SCS2201561_celltype_Hepatocyte_DEG_wilcoxon.csv 3,746,648 3,746,648 csv
SCS2201561_celltype_Macrophage_DEG_wilcoxon.csv 3,775,743 3,775,743 csv
SCS2201561_celltype_Monocyte_DEG_wilcoxon.csv 3,745,401 3,745,401 csv
SCS2201561_celltype_NK cell_DEG_wilcoxon.csv 3,702,757 3,702,757 csv
SCS2201561_celltype_Smooth muscle cell_DEG_wilcoxon.csv 4,067,961 4,067,961 csv
SCS2201561_celltype_T cell_DEG_wilcoxon.csv 3,721,487 3,721,487 csv
SCS2201561_celltype_Unknown_DEG_wilcoxon.csv 3,589,976 3,589,976 csv
SCS2201561_leiden_0_DEG_wilcoxon.csv 3,478,287 3,478,287 csv
SCS2201561_leiden_1_DEG_wilcoxon.csv 3,471,755 3,471,755 csv
SCS2201561_leiden_10_DEG_wilcoxon.csv 3,532,575 3,532,575 csv
SCS2201561_leiden_11_DEG_wilcoxon.csv 3,576,610 3,576,610 csv
SCS2201561_leiden_12_DEG_wilcoxon.csv 3,541,913 3,541,913 csv
SCS2201561_leiden_13_DEG_wilcoxon.csv 3,497,495 3,497,495 csv
SCS2201561_leiden_14_DEG_wilcoxon.csv 3,512,493 3,512,493 csv
SCS2201561_leiden_15_DEG_wilcoxon.csv 3,508,375 3,508,375 csv
SCS2201561_leiden_16_DEG_wilcoxon.csv 3,519,526 3,519,526 csv
SCS2201561_leiden_17_DEG_wilcoxon.csv 3,540,586 3,540,586 csv
SCS2201561_leiden_18_DEG_wilcoxon.csv 3,542,381 3,542,381 csv
SCS2201561_leiden_19_DEG_wilcoxon.csv 3,581,589 3,581,589 csv
SCS2201561_leiden_2_DEG_wilcoxon.csv 3,427,258 3,427,258 csv
SCS2201561_leiden_20_DEG_wilcoxon.csv 3,563,204 3,563,204 csv
SCS2201561_leiden_21_DEG_wilcoxon.csv 3,559,547 3,559,547 csv
SCS2201561_leiden_22_DEG_wilcoxon.csv 3,521,196 3,521,196 csv
SCS2201561_leiden_23_DEG_wilcoxon.csv 3,566,946 3,566,946 csv
SCS2201561_leiden_24_DEG_wilcoxon.csv 3,535,555 3,535,555 csv
SCS2201561_leiden_25_DEG_wilcoxon.csv 3,554,736 3,554,736 csv
SCS2201561_leiden_26_DEG_wilcoxon.csv 3,572,572 3,572,572 csv
SCS2201561_leiden_27_DEG_wilcoxon.csv 3,561,280 3,561,280 csv
SCS2201561_leiden_28_DEG_wilcoxon.csv 3,577,526 3,577,526 csv
SCS2201561_leiden_29_DEG_wilcoxon.csv 3,585,068 3,585,068 csv
SCS2201561_leiden_3_DEG_wilcoxon.csv 3,540,012 3,540,012 csv
SCS2201561_leiden_4_DEG_wilcoxon.csv 3,507,130 3,507,130 csv
SCS2201561_leiden_5_DEG_wilcoxon.csv 3,352,632 3,352,632 csv
SCS2201561_leiden_6_DEG_wilcoxon.csv 3,521,954 3,521,954 csv
SCS2201561_leiden_7_DEG_wilcoxon.csv 3,488,298 3,488,298 csv
SCS2201561_leiden_8_DEG_wilcoxon.csv 3,492,911 3,492,911 csv
SCS2201561_leiden_9_DEG_wilcoxon.csv 3,430,232 3,430,232 csv
SCS2204600_adata_cellType_annotated.h5ad 1,405,806,437 1,405,806,437 h5ad
SCS2204600_cell_metadata.csv 26,655,728 26,655,728 csv
SCS2204600_detected_gene_list.csv 347,818 347,818 csv
SCS2204600_hvg_list.csv 58,830 58,830 csv
SCS2204600_pca_embeddings.csv 35,686,147 35,686,147 csv
SCS2204600_tsne_embeddings.csv 3,534,642 3,534,642 csv
SCS2204600_umap_embeddings.csv 3,531,576 3,531,576 csv
SCS2204600_valiDrops_filtered_mtx.tar.gz 264,879,697 264,879,697 gz
Analysis pipeline(v2025.12)