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Study Development of AST-related cancer metastasis biomarker
Study Information
Accession
 SCS2203460
Date and Organization
Processed date 2023-05-27
Oranization Yonsei University College of Medicine
Publication
PubMed ID of publication
36991428
DOI of publication
10.1186/s12943-023-01753-7
Conditions
Species
Scientific Name Homo sapiens
Taxonomy ID 9606
Tissue
 Blood, Breast
Treatment
 -
Sex
 Female
Cell Line
 MDA231
Age
 -
Cell Type
 -
Development Stage
 -
Cell Subtype
Disease
 -
Isolate
 LM3_CTC, LM3_Tumor
Disease Stage
 -
Genotype
 -
Helath State
 -
Associated K-BDS/scDB
BioProject
 KAP220346
scDB Study
 N/A
BioSample
 All samples [2]
scDB Data
 All Data [2]
KRA
 All experiments [2]
Cell Browser
Cell Browse
Cell Browser
Cell Browser
Cell-cell interaction
Scatter plot
File
file 목록
File Name Size Type Published Download
SCS2202071_celltype_Epithelial cell_DEG_wilcoxon.csv 3,532,616 3,532,616 csv
SCS2202071_celltype_Erythrocyte_DEG_wilcoxon.csv 3,416,914 3,416,914 csv
SCS2202071_celltype_Fibroblast_DEG_wilcoxon.csv 3,444,858 3,444,858 csv
SCS2202071_celltype_Monocyte_DEG_wilcoxon.csv 3,455,886 3,455,886 csv
SCS2202071_celltype_Platelet_DEG_wilcoxon.csv 3,424,105 3,424,105 csv
SCS2202071_celltype_Preadipocyte_DEG_wilcoxon.csv 3,552,677 3,552,677 csv
SCS2202071_celltype_Proliferating epithelial cell_DEG_wilcoxon.csv 4,090,830 4,090,830 csv
SCS2202071_celltype_T cell_DEG_wilcoxon.csv 3,350,204 3,350,204 csv
SCS2202071_celltype_Unknown_DEG_wilcoxon.csv 3,399,799 3,399,799 csv
SCS2202071_leiden_0_DEG_wilcoxon.csv 3,189,740 3,189,740 csv
SCS2202071_leiden_1_DEG_wilcoxon.csv 3,201,357 3,201,357 csv
SCS2202071_leiden_10_DEG_wilcoxon.csv 3,228,502 3,228,502 csv
SCS2202071_leiden_11_DEG_wilcoxon.csv 3,212,659 3,212,659 csv
SCS2202071_leiden_12_DEG_wilcoxon.csv 3,249,116 3,249,116 csv
SCS2202071_leiden_13_DEG_wilcoxon.csv 3,232,475 3,232,475 csv
SCS2202071_leiden_14_DEG_wilcoxon.csv 3,246,415 3,246,415 csv
SCS2202071_leiden_15_DEG_wilcoxon.csv 3,264,256 3,264,256 csv
SCS2202071_leiden_16_DEG_wilcoxon.csv 3,217,946 3,217,946 csv
SCS2202071_leiden_17_DEG_wilcoxon.csv 3,265,038 3,265,038 csv
SCS2202071_leiden_18_DEG_wilcoxon.csv 3,222,450 3,222,450 csv
SCS2202071_leiden_19_DEG_wilcoxon.csv 3,246,371 3,246,371 csv
SCS2202071_leiden_2_DEG_wilcoxon.csv 3,146,092 3,146,092 csv
SCS2202071_leiden_3_DEG_wilcoxon.csv 3,188,538 3,188,538 csv
SCS2202071_leiden_4_DEG_wilcoxon.csv 3,161,669 3,161,669 csv
SCS2202071_leiden_5_DEG_wilcoxon.csv 3,215,354 3,215,354 csv
SCS2202071_leiden_6_DEG_wilcoxon.csv 3,203,083 3,203,083 csv
SCS2202071_leiden_7_DEG_wilcoxon.csv 3,212,194 3,212,194 csv
SCS2202071_leiden_8_DEG_wilcoxon.csv 3,199,172 3,199,172 csv
SCS2202071_leiden_9_DEG_wilcoxon.csv 3,193,951 3,193,951 csv
SCS2203460_adata_cellType_annotated.h5ad 6,954,015,108 6,954,015,108 h5ad
SCS2203460_cell_metadata.csv 10,185,443 10,185,443 csv
SCS2203460_detected_gene_list.csv 310,613 310,613 csv
SCS2203460_hvg_list.csv 33,148 33,148 csv
SCS2203460_pca_embeddings.csv 13,274,477 13,274,477 csv
SCS2203460_tsne_embeddings.csv 1,320,741 1,320,741 csv
SCS2203460_umap_embeddings.csv 1,316,415 1,316,415 csv
SCS2203460_valiDrops_filtered_mtx.tar.gz 195,999,446 195,999,446 gz
Analysis pipeline(v2025.12)