Study
Study
Gut Microbiota Drives the Expansion of Functionally Enhanced Colonic Regulatory T Cells with Unique TCR Repertoires and Transcriptome Profiles
Study Information
|
Accession
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SCS2202071 | ||||
|---|---|---|---|---|---|
|
Date and Organization
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|
Publication
|
|
Conditions
|
Species
|
|
|---|
Tissue |
Intestine | Treatment |
- |
|---|---|---|---|
Sex |
Pooled male and female | Cell Line |
- |
Age |
8~12 weeks | Cell Type |
Regulatory T cell |
Development Stage |
Adult | Cell Subtype |
|
Disease |
- | Isolate |
- |
Disease Stage |
- | Genotype |
Foxp3-IRES-DTR-GFP |
Helath State |
- | ||
Associated K-BDS/scDB
|
BioProject
|
KAP220207 |
scDB Study
|
N/A |
|---|---|---|---|
|
BioSample
|
All samples [1] |
scDB Data
|
All Data [1] |
|
KRA
|
All experiments [1] | ||
Cell Browser
Cell Browse
Cell Browser
Cell-cell interaction
Scatter plot
| File Name | Size | Type | Published | Download | |
|---|---|---|---|---|---|
| SCS2202071_adata_cellType_annotated.h5ad | 401,703,323 401,703,323 | h5ad | |||
| SCS2202071_cell_metadata.csv | 929,926 929,926 | csv | |||
| SCS2202071_celltype_Activated T cell_DEG_wilcoxon.csv | 2,070,457 2,070,457 | csv | |||
| SCS2202071_celltype_Epithelial cell_DEG_wilcoxon.csv | 2,035,143 2,035,143 | csv | |||
| SCS2202071_celltype_ILC2_DEG_wilcoxon.csv | 1,837,695 1,837,695 | csv | |||
| SCS2202071_celltype_Naive T cell_DEG_wilcoxon.csv | 1,978,376 1,978,376 | csv | |||
| SCS2202071_celltype_Regulatory T cell_DEG_wilcoxon.csv | 2,055,961 2,055,961 | csv | |||
| SCS2202071_celltype_T cell_DEG_wilcoxon.csv | 1,861,709 1,861,709 | csv | |||
| SCS2202071_celltype_Unknown_DEG_wilcoxon.csv | 1,878,247 1,878,247 | csv | |||
| SCS2202071_detected_gene_list.csv | 129,458 129,458 | csv | |||
| SCS2202071_hvg_list.csv | 24,926 24,926 | csv | |||
| SCS2202071_leiden_0_DEG_wilcoxon.csv | 1,760,538 1,760,538 | csv | |||
| SCS2202071_leiden_1_DEG_wilcoxon.csv | 1,778,020 1,778,020 | csv | |||
| SCS2202071_leiden_10_DEG_wilcoxon.csv | 1,787,170 1,787,170 | csv | |||
| SCS2202071_leiden_2_DEG_wilcoxon.csv | 1,775,137 1,775,137 | csv | |||
| SCS2202071_leiden_3_DEG_wilcoxon.csv | 1,767,148 1,767,148 | csv | |||
| SCS2202071_leiden_4_DEG_wilcoxon.csv | 280,999 280,999 | csv | |||
| SCS2202071_leiden_5_DEG_wilcoxon.csv | 1,780,131 1,780,131 | csv | |||
| SCS2202071_leiden_6_DEG_wilcoxon.csv | 1,790,339 1,790,339 | csv | |||
| SCS2202071_leiden_7_DEG_wilcoxon.csv | 1,746,549 1,746,549 | csv | |||
| SCS2202071_leiden_8_DEG_wilcoxon.csv | 1,797,245 1,797,245 | csv | |||
| SCS2202071_leiden_9_DEG_wilcoxon.csv | 1,777,564 1,777,564 | csv | |||
| SCS2202071_pca_embeddings.csv | 1,217,759 1,217,759 | csv | |||
| SCS2202071_tsne_embeddings.csv | 122,479 122,479 | csv | |||
| SCS2202071_umap_embeddings.csv | 120,347 120,347 | csv | |||
| SCS2202071_valiDrops_filtered_mtx.tar.gz | 14,260,802 14,260,802 | gz |