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Study Identification of FOXD2 as a chromatin tuning factor in intestinal stem cells and HCT116 cells
Study Information
Accession
 SCS2201701
Date and Organization
Processed date 2023-03-08
Oranization Pohang University of Science and Technology
Publication
PubMed ID of publication
DOI of publication
Conditions
Species
Scientific Name Mus musculus
Taxonomy ID 10090
Tissue
 Intestine
Treatment
 -
Sex
 -
Cell Line
 -
Age
 not collected
Cell Type
 -
Development Stage
 -
Cell Subtype
Disease
 -
Isolate
 -
Disease Stage
 -
Genotype
 Lgr5-EGFP-IRES-creERT2
Helath State
 -
Associated K-BDS/scDB
BioProject
 KAP220170
scDB Study
 N/A
BioSample
 All samples [1]
scDB Data
 All Data [1]
KRA
 All experiments [1]
Cell Browser
Cell Browse
Cell Browser
Cell Browser
Cell-cell interaction
Scatter plot
File
file 목록
File Name Size Type Published Download
SCS2201701_adata_cellType_annotated.h5ad 2,308,868,654 2,308,868,654 h5ad
SCS2201701_cell_metadata.csv 4,175,513 4,175,513 csv
SCS2201701_celltype_BEST4+ colonocyte_DEG_wilcoxon.csv 2,767,372 2,767,372 csv
SCS2201701_celltype_Best4+ enterocyte_DEG_wilcoxon.csv 2,767,372 2,767,372 csv
SCS2201701_celltype_Colonocyte_DEG_wilcoxon.csv 2,646,194 2,646,194 csv
SCS2201701_celltype_Deep crypt secretory cell_DEG_wilcoxon.csv 2,962,111 2,962,111 csv
SCS2201701_celltype_Dendritic cell_DEG_wilcoxon.csv 2,746,368 2,746,368 csv
SCS2201701_celltype_Enteroendocrine cell_DEG_wilcoxon.csv 2,863,656 2,863,656 csv
SCS2201701_celltype_Erythrocyte_DEG_wilcoxon.csv 2,659,435 2,659,435 csv
SCS2201701_celltype_Goblet cell_DEG_wilcoxon.csv 2,630,955 2,630,955 csv
SCS2201701_celltype_Intestinal stem cell_DEG_wilcoxon.csv 2,893,332 2,893,332 csv
SCS2201701_celltype_Secretory progenitor cell_DEG_wilcoxon.csv 3,006,740 3,006,740 csv
SCS2201701_celltype_Transit-amplifying cell_DEG_wilcoxon.csv 2,936,832 2,936,832 csv
SCS2201701_celltype_Transit-amplifying progenitor_DEG_wilcoxon.csv 3,083,802 3,083,802 csv
SCS2201701_celltype_Tuft cell_DEG_wilcoxon.csv 2,562,618 2,562,618 csv
SCS2201701_celltype_Unknown_DEG_wilcoxon.csv 2,562,438 2,562,438 csv
SCS2201701_detected_gene_list.csv 179,719 179,719 csv
SCS2201701_hvg_list.csv 37,587 37,587 csv
SCS2201701_leiden_0_DEG_wilcoxon.csv 2,375,450 2,375,450 csv
SCS2201701_leiden_1_DEG_wilcoxon.csv 2,390,436 2,390,436 csv
SCS2201701_leiden_10_DEG_wilcoxon.csv 2,414,645 2,414,645 csv
SCS2201701_leiden_11_DEG_wilcoxon.csv 2,391,151 2,391,151 csv
SCS2201701_leiden_12_DEG_wilcoxon.csv 2,422,744 2,422,744 csv
SCS2201701_leiden_13_DEG_wilcoxon.csv 2,424,254 2,424,254 csv
SCS2201701_leiden_14_DEG_wilcoxon.csv 2,443,353 2,443,353 csv
SCS2201701_leiden_15_DEG_wilcoxon.csv 2,435,581 2,435,581 csv
SCS2201701_leiden_16_DEG_wilcoxon.csv 2,441,401 2,441,401 csv
SCS2201701_leiden_17_DEG_wilcoxon.csv 2,452,438 2,452,438 csv
SCS2201701_leiden_18_DEG_wilcoxon.csv 2,438,978 2,438,978 csv
SCS2201701_leiden_19_DEG_wilcoxon.csv 2,402,613 2,402,613 csv
SCS2201701_leiden_2_DEG_wilcoxon.csv 2,404,749 2,404,749 csv
SCS2201701_leiden_3_DEG_wilcoxon.csv 2,392,439 2,392,439 csv
SCS2201701_leiden_4_DEG_wilcoxon.csv 2,417,420 2,417,420 csv
SCS2201701_leiden_5_DEG_wilcoxon.csv 2,414,713 2,414,713 csv
SCS2201701_leiden_6_DEG_wilcoxon.csv 2,387,686 2,387,686 csv
SCS2201701_leiden_7_DEG_wilcoxon.csv 2,399,502 2,399,502 csv
SCS2201701_leiden_8_DEG_wilcoxon.csv 2,402,507 2,402,507 csv
SCS2201701_leiden_9_DEG_wilcoxon.csv 2,374,229 2,374,229 csv
SCS2201701_pca_embeddings.csv 5,039,427 5,039,427 csv
SCS2201701_tsne_embeddings.csv 504,175 504,175 csv
SCS2201701_umap_embeddings.csv 498,065 498,065 csv
SCS2201701_valiDrops_filtered_mtx.tar.gz 103,673,711 103,673,711 gz
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