scDB: Study

Study

Study Single-cell transcriptome analysis for the identification of metastasis biomarkers and treatment targets in lung cancer

? Protocol optimization of single-cell RNA sequencing for lung cancer, and data statistics ? Strategy of quality control and normalization of single-cell transcriptome data for lung cancer patients : Profiling of single-cell transcriptome data for > 90 samples ? Classification of cancer and stromal components in lung cancer ? Distinct changes of tumor microenvironments during lung cancer progression and metastasis (Presentation in international conference/Invited talk: 11 cases, Presentation in domestic conference: 9 cases) ? Molecular subtyping of lung cancer and their specific biomarker (Korean patent application: 1 cases, Ongoing application for PCT patent) ? Construction of integrated network between cancer and the surrounding components (2 Publications (including top 10% of JCR) and 1 Submission) ? Website construction for release and application of single-cell transcriptome data

Study Information

Accession

SCS2101090

Date and Organization


Processed date	2021-12-03
Oranization	The Catholic University of Korea

Publication


PubMed ID of publication	33840167
DOI of publication	10.5808/gi.20073

Conditions

Species


Scientific Name	Homo sapiens
Taxonomy ID	9606


Tissue	Bodily fluid, Brain, Bronchus, Lung, Lymphoid tissue, Non-organ sample	Treatment	-
Sex	Female, Male	Cell Line	-
Age	-	Cell Type	-
Development Stage	-	Cell Subtype
Disease	Lung cancer	Isolate	Patient #0001, Patient #0006, Patient #0008, Patient #0009, Patient #0010, Patient #0012, Patient #0013, Patient #0018, Patient #0019, Patient #0020, Patient #0022, Patient #0023, Patient #0025, Patient #0028, Patient #0029, Patient #0030, Patient #0031, Patient #0034, Patient #1003, Patient #1005, Patient #1006, Patient #1007, Patient #1008, Patient #1009, Patient #1010, Patient #1011, Patient #1012, Patient #1013, Patient #1015, Patient #1019, Patient #1020, Patient #1022, Patient #1025, Patient #1026, Patient #1028, Patient #1032, Patient #1036, Patient #1037, Patient #1043, Patient #1049, Patient #1051, Patient #1054, Patient #1055, Patient #1056, Patient #1058, Patient #1069, Patient #1070, Patient #1071, Patient #1073, Patient #1074, Patient #1076, Patient #1078, Patient #1093, Patient #1095, Patient #1098, Patient #1099, Patient #1100, Patient #1101, Patient #1103, Patient #1104, Patient #1105, Patient #1111, Patient #1114, Patient #1119, Patient #1126, Patient #2001, Patient #2002, Patient #2003, Patient #2004, Patient #2005, Patient #2006, Patient #2007, Patient #2008, Patient #2011, Patient #2012, Patient #3001, Patient #3002, Patient #3003, Patient #3004, Patient #3005, Patient #3006, Patient #3007, Patient #3012, Patient #3013, Patient #3016, Patient #3017, Patient #3019, Patient #4001, Patient #4064
Disease Stage	-	Genotype	-
Helath State	-

Associated K-BDS/scDB


BioProject	KAP210109	scDB Study	N/A
BioSample	All samples [105]	scDB Data	All Data [209]
KRA	All experiments [209]

Analysis pipeline(v2025.12)

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scDB Single-cell Transcriptomics Database

Study