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Study Clinical validation of personalized immuno-therapy based on single cell-multiomics
Study Information
Accession
 SCS2000160
Date and Organization
Processed date 2022-01-01
Oranization Yonsei University College of Medicine
Publication
PubMed ID of publication
DOI of publication
Conditions
Species
Scientific Name Homo sapiens
Taxonomy ID 9606
Tissue
 Lung
Treatment
 -
Sex
 Female, Male
Cell Line
 -
Age
 -
Cell Type
 Tumor-infiltrating lymphocytes (TILs)
Development Stage
 -
Cell Subtype
 B cell, CD4 T cell, CD8 T cell, Epithelial cell, Erythrocyte, Erythroid cell, Macrophage, Mast cell, NK cell, Neutrophil, Plasma cell, Plasmacytoid dendritic cell, Regulatory T cell, T cell, Unknown
Disease
 Non-small cell lung carcinoma
Isolate
 Patient1, Patient10, Patient2, Patient3, Patient4, Patient5, Patient6, Patient7, Patient8, Patient9
Disease Stage
 -
Genotype
 -
Helath State
 -
Associated K-BDS/scDB
BioProject
 KAP200016
scDB Study
 N/A
BioSample
 All samples [10]
scDB Data
 All Data [10]
KRA
 All experiments [10]
Cell Browser
Cell Browse
Cell Browser
Cell Browser
Cell-cell interaction
Scatter plot
File
file 목록
File Name Size Type Published Download
SCS2000111_celltype_B cell_DEG_wilcoxon.csv 3,319,125 3,319,125 csv
SCS2000111_celltype_CD4 T cell_DEG_wilcoxon.csv 3,473,910 3,473,910 csv
SCS2000111_celltype_CD8 T cell_DEG_wilcoxon.csv 3,449,610 3,449,610 csv
SCS2000111_celltype_Epithelial cell_DEG_wilcoxon.csv 3,621,280 3,621,280 csv
SCS2000111_celltype_Erythrocyte_DEG_wilcoxon.csv 3,489,564 3,489,564 csv
SCS2000111_celltype_Erythroid cell_DEG_wilcoxon.csv 3,590,809 3,590,809 csv
SCS2000111_celltype_Macrophage_DEG_wilcoxon.csv 3,440,077 3,440,077 csv
SCS2000111_celltype_Mast cell_DEG_wilcoxon.csv 3,459,777 3,459,777 csv
SCS2000111_celltype_Neutrophil_DEG_wilcoxon.csv 3,481,016 3,481,016 csv
SCS2000111_celltype_NK cell_DEG_wilcoxon.csv 3,326,479 3,326,479 csv
SCS2000111_celltype_Plasma cell_DEG_wilcoxon.csv 3,490,873 3,490,873 csv
SCS2000111_celltype_Plasmacytoid dendritic cell_DEG_wilcoxon.csv 4,005,085 4,005,085 csv
SCS2000111_celltype_Regulatory T cell_DEG_wilcoxon.csv 3,683,540 3,683,540 csv
SCS2000111_celltype_T cell_DEG_wilcoxon.csv 3,345,291 3,345,291 csv
SCS2000111_celltype_Unknown_DEG_wilcoxon.csv 3,360,280 3,360,280 csv
SCS2000111_leiden_0_DEG_wilcoxon.csv 3,189,661 3,189,661 csv
SCS2000111_leiden_1_DEG_wilcoxon.csv 3,169,184 3,169,184 csv
SCS2000111_leiden_10_DEG_wilcoxon.csv 3,216,988 3,216,988 csv
SCS2000111_leiden_11_DEG_wilcoxon.csv 3,192,791 3,192,791 csv
SCS2000111_leiden_12_DEG_wilcoxon.csv 309,451 309,451 csv
SCS2000111_leiden_13_DEG_wilcoxon.csv 3,228,350 3,228,350 csv
SCS2000111_leiden_14_DEG_wilcoxon.csv 3,187,411 3,187,411 csv
SCS2000111_leiden_15_DEG_wilcoxon.csv 3,211,811 3,211,811 csv
SCS2000111_leiden_16_DEG_wilcoxon.csv 3,238,694 3,238,694 csv
SCS2000111_leiden_17_DEG_wilcoxon.csv 3,240,399 3,240,399 csv
SCS2000111_leiden_18_DEG_wilcoxon.csv 3,186,978 3,186,978 csv
SCS2000111_leiden_19_DEG_wilcoxon.csv 3,206,624 3,206,624 csv
SCS2000111_leiden_2_DEG_wilcoxon.csv 3,178,210 3,178,210 csv
SCS2000111_leiden_20_DEG_wilcoxon.csv 3,215,508 3,215,508 csv
SCS2000111_leiden_21_DEG_wilcoxon.csv 3,210,699 3,210,699 csv
SCS2000111_leiden_3_DEG_wilcoxon.csv 3,194,618 3,194,618 csv
SCS2000111_leiden_4_DEG_wilcoxon.csv 3,173,732 3,173,732 csv
SCS2000111_leiden_5_DEG_wilcoxon.csv 3,194,948 3,194,948 csv
SCS2000111_leiden_6_DEG_wilcoxon.csv 3,154,543 3,154,543 csv
SCS2000111_leiden_7_DEG_wilcoxon.csv 456,187 456,187 csv
SCS2000111_leiden_8_DEG_wilcoxon.csv 3,170,913 3,170,913 csv
SCS2000111_leiden_9_DEG_wilcoxon.csv 3,165,269 3,165,269 csv
SCS2000160_adata_cellType_annotated.h5ad 6,155,587,772 6,155,587,772 h5ad
SCS2000160_cell_metadata.csv 20,523,900 20,523,900 csv
SCS2000160_detected_gene_list.csv 303,267 303,267 csv
SCS2000160_hvg_list.csv 46,081 46,081 csv
SCS2000160_pca_embeddings.csv 23,947,372 23,947,372 csv
SCS2000160_tsne_embeddings.csv 2,390,146 2,390,146 csv
SCS2000160_umap_embeddings.csv 2,363,395 2,363,395 csv
SCS2000160_valiDrops_filtered_mtx.tar.gz 171,800,131 171,800,131 gz
Analysis pipeline(v2025.12)