Data
Data
HM_2
Data Information
|
Accession
|
SCD21066030 | ||||
|---|---|---|---|---|---|
|
Date and Organization
|
|
||||
|
Library Construction
|
Sample extraction was prepared using Chromium Single cell 3' Reagent Kits v3 10X Genomics according to the manufacturer's protocols. Sequencing library was prepared using Chromium Single cell 3' Reagent Kits v3 10X Genomics according to the manufacturer's protocols. |
Conditions
|
Species
|
|
|---|
Tissue |
Liver | Treatment |
- |
|---|---|---|---|
Sex |
- | Cell Line |
- |
Age |
- | Cell Type |
Organoid |
Development Stage |
- | Cell Subtype |
Gastric mucous neck cell, Hepatic progenitor cell, Hepatocyte, Unknown |
Disease |
- | Isolate |
Sample extraction was prepared using Chromium Single cell 3', Reagent Kits v3 (10X Genomics) according to the manufacturer?챦쩔_ protocols. |
Disease Stage |
- | Genotype |
- |
Helath State |
- | ||
Associated K-BDS/scDB
|
BioProject
|
KAP210038 |
scDB Study
|
SCS2100380 |
|---|---|---|---|
|
BioSample
|
All samples [1] |
scDB Data
|
All Data [1] |
|
KRA
|
All experiments [1] | ||
Cell Browser
Cell Browse
Cell Browser
Cell-cell interaction
Scatter plot
| File Name | Size | Type | Published | Download | |
|---|---|---|---|---|---|
| SCD21066030_adata_cellType_annotated.h5ad | 2,241,288,087 2,241,288,087 | h5ad | |||
| SCD21066030_cell_metadata.csv | 5,817,755 5,817,755 | csv | |||
| SCD21066030_celltype_Gastric mucous neck cell_DEG_wilcoxon.csv | 3,818,122 3,818,122 | csv | |||
| SCD21066030_celltype_Hepatic progenitor cell_DEG_wilcoxon.csv | 3,541,727 3,541,727 | csv | |||
| SCD21066030_celltype_Hepatocyte_DEG_wilcoxon.csv | 3,333,468 3,333,468 | csv | |||
| SCD21066030_celltype_Unknown_DEG_wilcoxon.csv | 3,125,572 3,125,572 | csv | |||
| SCD21066030_detected_gene_list.csv | 293,725 293,725 | csv | |||
| SCD21066030_hvg_list.csv | 71,482 71,482 | csv | |||
| SCD21066030_leiden_11_DEG_wilcoxon.csv | 3,145,998 3,145,998 | csv | |||
| SCD21066030_leiden_13_DEG_wilcoxon.csv | 3,122,973 3,122,973 | csv | |||
| SCD21066030_leiden_16_DEG_wilcoxon.csv | 3,060,554 3,060,554 | csv | |||
| SCD21066030_leiden_19_DEG_wilcoxon.csv | 3,120,439 3,120,439 | csv | |||
| SCD21066030_leiden_2_DEG_wilcoxon.csv | 3,060,141 3,060,141 | csv | |||
| SCD21066030_leiden_21_DEG_wilcoxon.csv | 3,059,024 3,059,024 | csv | |||
| SCD21066030_leiden_24_DEG_wilcoxon.csv | 3,107,095 3,107,095 | csv | |||
| SCD21066030_leiden_26_DEG_wilcoxon.csv | 3,086,480 3,086,480 | csv | |||
| SCD21066030_leiden_3_DEG_wilcoxon.csv | 3,058,507 3,058,507 | csv | |||
| SCD21066030_leiden_5_DEG_wilcoxon.csv | 3,003,069 3,003,069 | csv | |||
| SCD21066030_leiden_7_DEG_wilcoxon.csv | 2,979,523 2,979,523 | csv | |||
| SCD21066030_leiden_9_DEG_wilcoxon.csv | 3,068,552 3,068,552 | csv | |||
| SCD21066030_pca_embeddings.csv | 7,578,002 7,578,002 | csv | |||
| SCD21066030_raw_feature_bc_matrix.tar.gz | 175,315,173 175,315,173 | gz | |||
| SCD21066030_tsne_embeddings.csv | 761,005 761,005 | csv | |||
| SCD21066030_umap_embeddings.csv | 752,019 752,019 | csv |