Data
Data
DM_2
Data Information
|
Accession
|
SCD21066010 | ||||
|---|---|---|---|---|---|
|
Date and Organization
|
|
||||
|
Library Construction
|
Sample extraction was prepared using Chromium Single cell 3' Reagent Kits v3 10X Genomics according to the manufacturer's protocols. Sequencing library was prepared using Chromium Single cell 3' Reagent Kits v3 10X Genomics according to the manufacturer's protocols. |
Conditions
|
Species
|
|
|---|
Tissue |
Liver | Treatment |
- |
|---|---|---|---|
Sex |
- | Cell Line |
- |
Age |
- | Cell Type |
Organoid |
Development Stage |
- | Cell Subtype |
Cholangiocyte, Hepatic progenitor cell, Hepatocyte, Unknown |
Disease |
- | Isolate |
Sample extraction was prepared using Chromium Single cell 3', Reagent Kits v3 (10X Genomics) according to the manufacturer?챦쩔_ protocols. |
Disease Stage |
- | Genotype |
- |
Helath State |
- | ||
Associated K-BDS/scDB
|
BioProject
|
KAP210038 |
scDB Study
|
SCS2100380 |
|---|---|---|---|
|
BioSample
|
All samples [1] |
scDB Data
|
All Data [1] |
|
KRA
|
All experiments [1] | ||
Cell Browser
Cell Browse
Cell Browser
Cell-cell interaction
Scatter plot
| File Name | Size | Type | Published | Download | |
|---|---|---|---|---|---|
| SCD21066010_adata_cellType_annotated.h5ad | 2,159,778,485 2,159,778,485 | h5ad | |||
| SCD21066010_cell_metadata.csv | 5,329,798 5,329,798 | csv | |||
| SCD21066010_celltype_Hepatic progenitor cell_DEG_wilcoxon.csv | 554,523 554,523 | csv | |||
| SCD21066010_celltype_Hepatocyte_DEG_wilcoxon.csv | 3,305,350 3,305,350 | csv | |||
| SCD21066010_celltype_Unknown_DEG_wilcoxon.csv | 3,261,049 3,261,049 | csv | |||
| SCD21066010_detected_gene_list.csv | 296,349 296,349 | csv | |||
| SCD21066010_hvg_list.csv | 54,469 54,469 | csv | |||
| SCD21066010_leiden_0_DEG_wilcoxon.csv | 3,129,715 3,129,715 | csv | |||
| SCD21066010_leiden_13_DEG_wilcoxon.csv | 3,079,483 3,079,483 | csv | |||
| SCD21066010_leiden_16_DEG_wilcoxon.csv | 3,133,018 3,133,018 | csv | |||
| SCD21066010_leiden_19_DEG_wilcoxon.csv | 3,163,650 3,163,650 | csv | |||
| SCD21066010_leiden_21_DEG_wilcoxon.csv | 3,149,162 3,149,162 | csv | |||
| SCD21066010_leiden_24_DEG_wilcoxon.csv | 3,071,968 3,071,968 | csv | |||
| SCD21066010_leiden_26_DEG_wilcoxon.csv | 3,094,371 3,094,371 | csv | |||
| SCD21066010_leiden_3_DEG_wilcoxon.csv | 3,013,267 3,013,267 | csv | |||
| SCD21066010_leiden_5_DEG_wilcoxon.csv | 3,094,585 3,094,585 | csv | |||
| SCD21066010_leiden_7_DEG_wilcoxon.csv | 3,094,776 3,094,776 | csv | |||
| SCD21066010_leiden_9_DEG_wilcoxon.csv | 3,094,581 3,094,581 | csv | |||
| SCD21066010_pca_embeddings.csv | 6,990,903 6,990,903 | csv | |||
| SCD21066010_raw_feature_bc_matrix.tar.gz | 195,824,900 195,824,900 | gz | |||
| SCD21066010_tsne_embeddings.csv | 703,069 703,069 | csv | |||
| SCD21066010_umap_embeddings.csv | 696,940 696,940 | csv |