Data
Data
DM_1
Data Information
|
Accession
|
SCD21066000 | ||||
|---|---|---|---|---|---|
|
Date and Organization
|
|
||||
|
Library Construction
|
Sample extraction was prepared using Chromium Single cell 3' Reagent Kits v3 10X Genomics according to the manufacturer's protocols. Sequencing library was prepared using Chromium Single cell 3' Reagent Kits v3 10X Genomics according to the manufacturer's protocols. |
Conditions
|
Species
|
|
|---|
Tissue |
Liver | Treatment |
- |
|---|---|---|---|
Sex |
- | Cell Line |
- |
Age |
- | Cell Type |
Organoid |
Development Stage |
- | Cell Subtype |
Cholangiocyte, Enterocyte, Hepatic progenitor cell, Hepatocyte, Unknown |
Disease |
- | Isolate |
Sample extraction was prepared using Chromium Single cell 3', Reagent Kits v3 (10X Genomics) according to the manufacturer?챦쩔_ protocols. |
Disease Stage |
- | Genotype |
- |
Helath State |
- | ||
Associated K-BDS/scDB
|
BioProject
|
KAP210038 |
scDB Study
|
SCS2100380 |
|---|---|---|---|
|
BioSample
|
All samples [1] |
scDB Data
|
All Data [1] |
|
KRA
|
All experiments [1] | ||
Cell Browser
Cell Browse
Cell Browser
Cell-cell interaction
Scatter plot
| File Name | Size | Type | Published | Download | |
|---|---|---|---|---|---|
| SCD21066000_adata_cellType_annotated.h5ad | 2,453,029,229 2,453,029,229 | h5ad | |||
| SCD21066000_cell_metadata.csv | 6,344,551 6,344,551 | csv | |||
| SCD21066000_celltype_Cholangiocyte_DEG_wilcoxon.csv | 3,378,554 3,378,554 | csv | |||
| SCD21066000_celltype_Hepatic progenitor cell_DEG_wilcoxon.csv | 3,730,486 3,730,486 | csv | |||
| SCD21066000_celltype_Hepatocyte_DEG_wilcoxon.csv | 3,212,256 3,212,256 | csv | |||
| SCD21066000_celltype_Unknown_DEG_wilcoxon.csv | 3,174,794 3,174,794 | csv | |||
| SCD21066000_detected_gene_list.csv | 289,452 289,452 | csv | |||
| SCD21066000_hvg_list.csv | 57,993 57,993 | csv | |||
| SCD21066000_leiden_0_DEG_wilcoxon.csv | 2,975,047 2,975,047 | csv | |||
| SCD21066000_leiden_13_DEG_wilcoxon.csv | 3,023,625 3,023,625 | csv | |||
| SCD21066000_leiden_16_DEG_wilcoxon.csv | 3,069,446 3,069,446 | csv | |||
| SCD21066000_leiden_19_DEG_wilcoxon.csv | 3,075,502 3,075,502 | csv | |||
| SCD21066000_leiden_24_DEG_wilcoxon.csv | 3,075,991 3,075,991 | csv | |||
| SCD21066000_leiden_25_DEG_wilcoxon.csv | 3,046,220 3,046,220 | csv | |||
| SCD21066000_leiden_26_DEG_wilcoxon.csv | 3,082,371 3,082,371 | csv | |||
| SCD21066000_leiden_3_DEG_wilcoxon.csv | 3,072,372 3,072,372 | csv | |||
| SCD21066000_leiden_5_DEG_wilcoxon.csv | 3,036,010 3,036,010 | csv | |||
| SCD21066000_leiden_9_DEG_wilcoxon.csv | 3,032,711 3,032,711 | csv | |||
| SCD21066000_pca_embeddings.csv | 8,355,971 8,355,971 | csv | |||
| SCD21066000_raw_feature_bc_matrix.tar.gz | 191,984,531 191,984,531 | gz | |||
| SCD21066000_tsne_embeddings.csv | 839,561 839,561 | csv | |||
| SCD21066000_umap_embeddings.csv | 828,446 828,446 | csv |