KRA: Browse

BioProject

KAP241464

BioProject Title

Genome sequencing of microbial strains collected by Korean Collection for Type Cultures (KCTC) (DDBJ: PRJDB37369)

This BioProject aims to provide Illumina raw sequencing data for microbial resources (mostly type strains) held by KCTC, whose genome sequences had not been available as of 2013. Microbial strains for genome sequencing were selected by Dr. Byoung-Chan Kim (currently at HealthBiome, Inc.) and Dong-Ho Chang.

Common Fields

Common Fields - BioProject, Data Type, Submission date, Access, Release date, Runs
BioProject	KAP241464
Data Type	fastq
Submission date	2025-02-21
Access	Public
Release date	2025-03-03
Runs	56

Accession

Accession - Division, BIOSAMPLEs
Division	Run	Bytes	Download
Total	56	72,697,284,857 72,697,284,857	Metadata

BioProject * All samples * All experiments

Run Metadata

Primary

(56 cases)

Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
Run ID	identifier	Experiment ID	BioSample ID	library name	filetype	file name	bytes (total)	Registration date	Release date	Access type	Protocol
KAR24088095	DRA : DRR879033	KAE24088095	KAS24111352	pair_GENOMIC_sample_12221T	fastq	12221T_1.fastq.gz \| 12221T_2.fastq.gz	639,996,609 639,996,609	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088096	DRA : DRR879034	KAE24088096	KAS24111353	pair_GENOMIC_sample_22662T	fastq	22662T_1.fastq.gz \| 22662T_2.fastq.gz	490,249,119 490,249,119	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088097	DRA : DRR879035	KAE24088097	KAS24111354	pair_GENOMIC_sample_12364T	fastq	12364T_1.fastq.gz \| 12364T_2.fastq.gz	890,181,201 890,181,201	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088098	DRA : DRR879036	KAE24088098	KAS24111355	pair_GENOMIC_sample_3572T	fastq	3572T_1.fastq.gz \| 3572T_2.fastq.gz	1,184,679,761 1,184,679,761	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088099	DRA : DRR879037	KAE24088099	KAS24111356	pair_GENOMIC_sample_3914T	fastq	3914T_1.fastq.gz \| 3914T_2.fastq.gz	905,425,428 905,425,428	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088100	DRA : DRR879038	KAE24088100	KAS24111357	pair_GENOMIC_sample_3398T	fastq	3398T_1.fastq.gz \| 3398T_2.fastq.gz	814,245,841 814,245,841	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088101	DRA : DRR879039	KAE24088101	KAS24111358	pair_GENOMIC_sample_3446T	fastq	3446T_1.fastq.gz \| 3446T_2.fastq.gz	815,482,199 815,482,199	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088102	DRA : DRR879040	KAE24088102	KAS24111359	pair_GENOMIC_sample_9076T	fastq	9076T_1.fastq.gz \| 9076T_2.fastq.gz	1,352,853,870 1,352,853,870	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088103	DRA : DRR879041	KAE24088103	KAS24111360	pair_GENOMIC_sample_3005T	fastq	3005T_1.fastq.gz \| 3005T_2.fastq.gz	1,024,696,036 1,024,696,036	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088104	DRA : DRR879042	KAE24088104	KAS24111361	pair_GENOMIC_sample_3816T	fastq	3816T_1.fastq.gz \| 3816T_2.fastq.gz	1,867,944,861 1,867,944,861	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088105	DRA : DRR879043	KAE24088105	KAS24111362	pair_GENOMIC_sample_3880	fastq	3880_1.fastq.gz \| 3880_2.fastq.gz	1,686,748,375 1,686,748,375	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088106	DRA : DRR879044	KAE24088106	KAS24111363	pair_GENOMIC_sample_3347T	fastq	3347T_1.fastq.gz \| 3347T_2.fastq.gz	1,913,460,354 1,913,460,354	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088107	DRA : DRR879045	KAE24088107	KAS24111364	pair_GENOMIC_sample_2843T	fastq	2843T_1.fastq.gz \| 2843T_2.fastq.gz	1,913,566,584 1,913,566,584	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088108	DRA : DRR879046	KAE24088108	KAS24111365	pair_GENOMIC_sample_3539T	fastq	3539T_1.fastq.gz \| 3539T_2.fastq.gz	1,177,406,807 1,177,406,807	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088109	DRA : DRR879047	KAE24088109	KAS24111366	pair_GENOMIC_sample_3739T	fastq	3739T_1.fastq.gz \| 3739T_2.fastq.gz	2,455,757,147 2,455,757,147	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088110	DRA : DRR879048	KAE24088110	KAS24111367	pair_GENOMIC_sample_3776T	fastq	3776T_1.fastq.gz \| 3776T_2.fastq.gz	1,819,081,551 1,819,081,551	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088111	DRA : DRR879049	KAE24088111	KAS24111368	pair_GENOMIC_sample_3859T	fastq	3859T_1.fastq.gz \| 3859T_2.fastq.gz	1,104,515,421 1,104,515,421	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088112	DRA : DRR879050	KAE24088112	KAS24111369	pair_GENOMIC_sample_3626T	fastq	3626T_1.fastq.gz \| 3626T_2.fastq.gz	1,199,720,193 1,199,720,193	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088113	DRA : DRR879051	KAE24088113	KAS24111370	pair_GENOMIC_sample_3738T	fastq	3738T_1.fastq.gz \| 3738T_2.fastq.gz	442,051,220 442,051,220	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088114	DRA : DRR879052	KAE24088114	KAS24111371	pair_GENOMIC_sample_13003T	fastq	13003T_1.fastq.gz \| 13003T_2.fastq.gz	1,227,366,714 1,227,366,714	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088115	DRA : DRR879053	KAE24088115	KAS24111372	pair_GENOMIC_sample_13015T	fastq	13015T_1.fastq.gz \| 13015T_2.fastq.gz	1,306,278,785 1,306,278,785	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088116	DRA : DRR879054	KAE24088116	KAS24111373	pair_GENOMIC_sample_3994T	fastq	3994T_1.fastq.gz \| 3994T_2.fastq.gz	1,064,490,658 1,064,490,658	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088117	DRA : DRR879055	KAE24088117	KAS24111374	pair_GENOMIC_sample_3448T	fastq	3448T_1.fastq.gz \| 3448T_2.fastq.gz	963,572,946 963,572,946	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088118	DRA : DRR879056	KAE24088118	KAS24111375	pair_GENOMIC_sample_3828T	fastq	3828T_1.fastq.gz \| 3828T_2.fastq.gz	1,239,192,386 1,239,192,386	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088119	DRA : DRR879057	KAE24088119	KAS24111376	pair_GENOMIC_sample_3808T	fastq	3808T_1.fastq.gz \| 3808T_2.fastq.gz	2,283,986,191 2,283,986,191	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088120	DRA : DRR879058	KAE24088120	KAS24111377	pair_GENOMIC_sample_3579T	fastq	3579T_1.fastq.gz \| 3579T_2.fastq.gz	1,653,735,161 1,653,735,161	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088121	DRA : DRR879059	KAE24088121	KAS24111378	pair_GENOMIC_sample_3829T	fastq	3829T_1.fastq.gz \| 3829T_2.fastq.gz	1,240,826,256 1,240,826,256	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088122	DRA : DRR879060	KAE24088122	KAS24111379	pair_GENOMIC_sample_3764T	fastq	3764T_1.fastq.gz \| 3764T_2.fastq.gz	2,014,834,482 2,014,834,482	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088123	DRA : DRR879061	KAE24088123	KAS24111380	pair_GENOMIC_sample_3590T	fastq	3590T_1.fastq.gz \| 3590T_2.fastq.gz	1,241,231,078 1,241,231,078	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088124	DRA : DRR879062	KAE24088124	KAS24111381	pair_GENOMIC_sample_3791T	fastq	3791T_1.fastq.gz \| 3791T_2.fastq.gz	1,926,127,270 1,926,127,270	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088125	DRA : DRR879063	KAE24088125	KAS24111382	pair_GENOMIC_sample_3585T	fastq	3585T_1.fastq.gz \| 3585T_2.fastq.gz	1,086,012,505 1,086,012,505	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088126	DRA : DRR879064	KAE24088126	KAS24111383	pair_GENOMIC_sample_3810T	fastq	3810T_1.fastq.gz \| 3810T_2.fastq.gz	1,198,666,218 1,198,666,218	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088127	DRA : DRR879065	KAE24088127	KAS24111384	pair_GENOMIC_sample_3813T	fastq	3813T_1.fastq.gz \| 3813T_2.fastq.gz	1,539,187,059 1,539,187,059	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088128	DRA : DRR879066	KAE24088128	KAS24111385	pair_GENOMIC_sample_3798T	fastq	3798T_1.fastq.gz \| 3798T_2.fastq.gz	1,724,331,890 1,724,331,890	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088129	DRA : DRR879067	KAE24088129	KAS24111386	pair_GENOMIC_sample_33142T	fastq	33142T_1.fastq.gz \| 33142T_2.fastq.gz	746,118,902 746,118,902	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088130	DRA : DRR879068	KAE24088130	KAS24111387	pair_GENOMIC_sample_33143	fastq	33143_1.fastq.gz \| 33143_2.fastq.gz	733,954,208 733,954,208	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088131	DRA : DRR879069	KAE24088131	KAS24111388	pair_GENOMIC_sample_32503T	fastq	32503T_1.fastq.gz \| 32503T_2.fastq.gz	395,756,522 395,756,522	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088132	DRA : DRR879070	KAE24088132	KAS24111389	pair_GENOMIC_sample_32215T	fastq	32215T_1.fastq.gz \| 32215T_2.fastq.gz	312,878,943 312,878,943	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088133	DRA : DRR879071	KAE24088133	KAS24111390	pair_GENOMIC_sample_33012T	fastq	33012T_1.fastq.gz \| 33012T_2.fastq.gz	440,727,728 440,727,728	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088134	DRA : DRR879072	KAE24088134	KAS24111391	pair_GENOMIC_sample_33013T	fastq	33013T_1.fastq.gz \| 33013T_2.fastq.gz	500,339,383 500,339,383	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088135	DRA : DRR879073	KAE24088135	KAS24111392	pair_GENOMIC_sample_3447T	fastq	3447T_1.fastq.gz \| 3447T_2.fastq.gz	995,709,659 995,709,659	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088136	DRA : DRR879074	KAE24088136	KAS24111393	pair_GENOMIC_sample_43239	fastq	43239_1.fastq.gz \| 43239_2.fastq.gz	1,601,075,249 1,601,075,249	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088137	DRA : DRR879075	KAE24088137	KAS24111394	pair_GENOMIC_sample_43059T	fastq	43059T_1.fastq.gz \| 43059T_2.fastq.gz	3,495,741,264 3,495,741,264	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088138	DRA : DRR879076	KAE24088138	KAS24111395	pair_GENOMIC_sample_42065	fastq	42065_1.fastq.gz \| 42065_2.fastq.gz	1,024,523,049 1,024,523,049	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088139	DRA : DRR879077	KAE24088139	KAS24111396	pair_GENOMIC_sample_HR18	fastq	HR18_1.fastq.gz \| HR18_2.fastq.gz	1,169,048,729 1,169,048,729	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088140	DRA : DRR879078	KAE24088140	KAS24111397	pair_GENOMIC_sample_K10	fastq	K10_1.fastq.gz \| K10_2.fastq.gz	2,273,622,199 2,273,622,199	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088141	DRA : DRR879079	KAE24088141	KAS24111398	pair_GENOMIC_sample_3395T	fastq	3395T_1.fastq.gz \| 3395T_2.fastq.gz	1,345,420,705 1,345,420,705	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088142	DRA : DRR879080	KAE24088142	KAS24111399	pair_GENOMIC_sample_15385	fastq	15385_1.fastq.gz \| 15385_2.fastq.gz	1,013,600,844 1,013,600,844	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088143	DRA : DRR879081	KAE24088143	KAS24111400	pair_GENOMIC_sample_32234	fastq	32234_1.fastq.gz \| 32234_2.fastq.gz	2,489,584,177 2,489,584,177	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088144	DRA : DRR879082	KAE24088144	KAS24111401	pair_GENOMIC_sample_MAE15	fastq	MAE15_1.fastq.gz \| MAE15_2.fastq.gz	2,251,898,983 2,251,898,983	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088145	DRA : DRR879083	KAE24088145	KAS24111402	pair_GENOMIC_sample_5375	fastq	5375_1.fastq.gz \| 5375_2.fastq.gz	631,778,571 631,778,571	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088146	DRA : DRR879084	KAE24088146	KAS24111403	pair_GENOMIC_sample_12304T	fastq	12304T_1.fastq.gz \| 12304T_2.fastq.gz	1,103,538,197 1,103,538,197	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088147	DRA : DRR879085	KAE24088147	KAS24111404	pair_GENOMIC_sample_PAMC21329	fastq	PAMC21329_1.fastq.gz \| PAMC21329_2.fastq.gz	756,333,441 756,333,441	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088148	DRA : DRR879086	KAE24088148	KAS24111405	pair_GENOMIC_sample_ATCC700165T	fastq	ATCC700165T_1.fastq.gz \| ATCC700165T_2.fastq.gz	2,418,338,230 2,418,338,230	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088149	DRA : DRR879087	KAE24088149	KAS24111406	pair_GENOMIC_sample_DSM12408T	fastq	DSM12408T_1.fastq.gz \| DSM12408T_2.fastq.gz	691,626,331 691,626,331	2025-02-21	2025-03-03	PUBLIC	Protocol
KAR24088150	DRA : DRR879088	KAE24088150	KAS24111407	pair_GENOMIC_sample_I14	fastq	I14_1.fastq.gz \| I14_2.fastq.gz	897,767,367 897,767,367	2025-02-21	2025-03-03	PUBLIC	Protocol

Analysis

(0 cases)

Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
Analysis ID	analysis type	analysis file	bytes(GB)	Release date	Processed method
No Run data.

Reference

(0 cases)

Run Metadata - RUN ID, EXPERIMENT ID, BIOSAMPLE ID, LIBRARY IDENTIFIER, TYPE OF PRIMARY DATA FILE, NAME OF PRIMARY DATA FILE
reference type	RefSeq accession ID	file name
No Run data.

TOP

이전 사이트 이동

KRA Korea Sequence Read Archive