BioProject
KAP241464
BioProject Title
Genome sequencing of microbial strains collected by Korean Collection for Type Cultures (KCTC)
(DDBJ: PRJDB37369)
Common Fields
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BioProject
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KAP241464 |
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Taxonomic type
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Organism
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Bacillus solimangrovi
(1305675)
,
Paenibacillus dokdonensis
(2567944)
,
Acinetobacter halotolerans
(1752076)
,
Acinetobacter sp.
(472)
,
Bacillus badius
(1455)
,
Bizionia paragorgiae
(283786)
,
Blautia coccoides
(1532)
,
Bordetella trematum
(123899)
,
Brevibacillus invocatus
(173959)
,
Clostridium composti
(2569155)
,
Cytobacillus firmus
(1399)
,
Cytobacillus horneckiae
(549687)
,
Cytobacillus kochii
(859143)
,
Exiguobacterium undae
(169177)
,
Formosa algae
(225843)
,
Gelidibacter algens
(49280)
,
Heyndrickxia oleronia
(38875)
,
Heyndrickxia shackletonii
(157838)
,
Jeotgalibacillus marinus
(86667)
,
Lederbergia lenta
(1467)
,
Marinococcus haplophilus
,
Marivivens sp.
(1978374)
,
Metabacillus indicus
(246786)
,
Niallia circulans
(1397)
,
Paenibacillus amylolyticus
(1451)
,
Paenibacillus azoreducens
(116718)
,
Paenibacillus chitinolyticus
(79263)
,
Paenibacillus glucanolyticus
(59843)
,
Paenibacillus glycanilyticus
(126569)
,
Paenibacillus pabuli
(1472)
,
Paenibacillus rhizosphaerae
(297318)
,
Paenibacillus stellifer
(169760)
,
Paenibacillus thiaminolyticus
(49283)
,
Paenibacillus turicensis
(160487)
,
Paenibacillus validus
(44253)
,
Planococcus maritimus
(192421)
,
Priestia koreensis
(284581)
,
Pseudoscardovia radai
(987066)
,
Rothia amarae
(169480)
,
Schinkia azotoformans
(1454)
,
Sporosarcina psychrophila
(1476)
,
Staphylococcus chromogenes
(46126)
,
Staphylococcus gallinarum
(1293)
,
Staphylococcus kloosii
(29384)
,
Sunxiuqinia dokdonensis
(1409788)
,
Sunxiuqinia elliptica
(655355)
,
Sutcliffiella cohnii
(33932)
,
Sutcliffiella halmapala
(79882)
,
Thermoactinomyces vulgaris
(2026)
,
Vibrio injenensis
,
Virgibacillus pantothenticus
(1473)
,
Winogradskyella thalassocola
(262004)
,
Xanthomarina sp.
(1931211)
,
Xanthomarina spongicola
(570520)
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Biomaterial provider
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Byoung-Chan Kim, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Korean Collection for Type Cultures (KCTC), Kyung Sook Bae, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Young Hyo Chang, Korea Research Institute of Bioscience and Biotechnology (KRIBB)
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Submission date
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2025-02-21 |
Accession
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Experiments
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BioSample [Microbe]
Showing of 1-20 of 56 cases
| BioSample ID | Identifier | Sample name | Altitude | Biomaterial provider | Broad-scale environmental context | Collected by | Collection Date | Culture collection | Depth | Derived from | Description | Ecotype | Geographic location | Growth protocol | Host | Host tissue sampled | Identified by | Isolate | Isolation source | Lab host | Latitude and longitude | Mating type | NCBI taxonomy ID | Organism | Passage history | Sample size | Sample type | Serotype | Serovar | Specimen voucher | Strain | Temperature | Treatment | Other characteristics | Registration Date |
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| KAS24111407 | DRA : SAMD01618913 | I14 | Kyung Sook Bae, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | Not applicable | Not applicable | 336277 | Marivivens sp. | cell culture | Not applicable | I-14 | 2025-02-19 | |||||||||||||||||||||||
| KAS24111406 | DRA : SAMD01618912 | DSM12408T | Byoung-Chan Kim, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | DSMZ | Antarctica: Ellis Fjord, Vestfold Hills | sea ice | 49280 | Gelidibacter algens | cell culture | DSMZ:12408 | DSM 12408 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111405 | DRA : SAMD01618911 | ATCC700165T | Byoung-Chan Kim, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | ATCC | Not applicable | Not applicable | 79882 | Sutcliffiella halmapala | cell culture | ATCC:700165 | ATCC 700165 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111404 | DRA : SAMD01618910 | PAMC21329 | Kyung Sook Bae, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | PAMC | Antartica: King George Island, South Shetland Islands | soil | 62.1300 S 58.4700 W | 225842 | Xanthomarina sp. | cell culture | PAMC:21329 | PAMC 21329 | 2025-02-19 | |||||||||||||||||||||
| KAS24111403 | DRA : SAMD01618909 | 12304T | Korean Collection for Type Cultures (KCTC) | Not applicable | KCTC | Russian Federation: Makarov Bay, Iturup Island, Sea of Okhotsk | soft coral Paragoria arborea | 283786 | Bizionia paragorgiae | cell culture | KCTC:12304 | KCTC 12304 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111402 | DRA : SAMD01618908 | 5375 | Young Hyo Chang, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | 2006-05 | South Korea: Boryeong-si, Chungcheongnam-do | pig feces | 1678 | Pseudoscardovia radai | cell culture | KCTC:5375 | KCTC 5375;MY-PB24 | 2025-02-19 | |||||||||||||||||||||||
| KAS24111401 | DRA : SAMD01618907 | MAE15 | Young Hyo Chang, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | 2007-05 | South Korea: Seodo, Dokdo, East Sea | sea water | 469 | Acinetobacter halotolerans | cell culture | Not applicable | MAE15 | 2025-02-19 | |||||||||||||||||||||||
| KAS24111400 | DRA : SAMD01618906 | 32234 | Young Hyo Chang, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | KCTC | South Korea: Busan | Homo sapiens | blood and pus | 1307414 | Vibrio injenensis | cell culture | KCTC:32234 | KCTC 32234;M12-1181 | 2025-02-19 | |||||||||||||||||||||
| KAS24111399 | DRA : SAMD01618905 | 15385 | Young Hyo Chang, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | KCTC | South Korea: Jeollabuk-do | soil, Naejangsan Mountain | 1485 | Clostridium composti | cell culture | KCTC:15385 | KCTC 15385;TAN35 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111398 | DRA : SAMD01618904 | 3395T | Korean Collection for Type Cultures (KCTC) | Not applicable | KCTC | Not applicable | Not applicable | 59843 | Paenibacillus glucanolyticus | cell culture | KCTC:3395 | KCTC 3395 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111397 | DRA : SAMD01618903 | K10 | Byoung-Chan Kim, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | Not applicable | Homo sapiens | 8 week continuous culture enrichments of human feces with cellulose or xylan/pectin 2:1 mix | 1201806 | Blautia coccoides | cell culture | Not applicable | NLAE-zl-H470 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111396 | DRA : SAMD01618902 | HR18 | Byoung-Chan Kim, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | 2014-01-23 | South Korea | Bos taurus | rumen fluid of Korean native cattle (HanWoo) | 123899 | Bordetella trematum | cell culture | Not applicable | HR18 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111395 | DRA : SAMD01618901 | 42065 | Byoung-Chan Kim, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | 2014-01-23 | KCTC | South Korea: Suwon | Bos taurus | rumen fluid of Korean native cattle (HanWoo) | 469 | Acinetobacter sp. | cell culture | KCTC:42065 | KCTC 42065;HR7 | 2025-02-19 | |||||||||||||||||||||
| KAS24111394 | DRA : SAMD01618900 | 43059T | Young Hyo Chang, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | KCTC | South Korea: Seodo, Dokdo, East Sea | soil | 2567944 | Paenibacillus dokdonensis | cell culture | KCTC:43059 | KCTC 43059;YH-JAE5 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111393 | DRA : SAMD01618899 | 43239 | Young Hyo Chang, Korea Research Institute of Bioscience and Biotechnology (KRIBB) | Not applicable | KCTC | South Korea: Seodo, Dokdo, East Sea | soil | 2567944 | Paenibacillus dokdonensis | cell culture | KCTC:43239 | KCTC 43239;YH-JAE2 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111392 | DRA : SAMD01618898 | 3447T | Korean Collection for Type Cultures (KCTC) | Not applicable | KCTC | Not applicable | garden soil | 1454 | Schinkia azotoformans | cell culture | KCTC:3447 | KCTC 3447 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111391 | DRA : SAMD01618897 | 33013T | Korean Collection for Type Cultures (KCTC) | Not applicable | KCTC | USA: Florida | spacecraft-assembly clean room | 549687 | Cytobacillus horneckiae | cell culture | KCTC:33013 | KCTC 33013 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111390 | DRA : SAMD01618896 | 33012T | Korean Collection for Type Cultures (KCTC) | 2008-09-01 | KCTC | Germany: Ochsenfurt, Bavaria | dairy product | 859143 | Cytobacillus kochii | cell culture | KCTC:33012 | KCTC 33012 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111389 | DRA : SAMD01618895 | 32215T | Korean Collection for Type Cultures (KCTC) | Not applicable | KCTC | China: Jimo, Qingdao | sediment of a seashore pond for sea cucumber culture | 655355 | Sunxiuqinia elliptica | cell culture | KCTC:32215 | KCTC 32215 | 2025-02-19 | ||||||||||||||||||||||
| KAS24111388 | DRA : SAMD01618894 | 32503T | Korean Collection for Type Cultures (KCTC) | Not applicable | KCTC | South Korea: Dokdo, East Sea | deep sub-seafloor sediment off the coast of Dokdo | 34.2414 N 131.8605 E | 1409788 | Sunxiuqinia dokdonensis | cell culture | KCTC:32503 | KCTC 32503 | 2025-02-19 |