KNA legacy(~2024)
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AccessionKNA1000000166
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Submission date2023-02-17
Project Detail
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BioProject
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KAP240283 |
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Project title
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Development of non-culture based rapid multiplex diagnostic system for detection of major Aspergillus species and azole-resistance in invasive aspergillosis
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Project description
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This study developed a non-culture molecular diagnostic method for species identification and rapid diagnosis of azole-resistance in invasive aspergillosis with a high mortality rate, and evaluated the clinical utility of the developed diagnostic method. Using this, we intend to lay the foundation for overcoming intractable diseases by presenting a clinically standardized diagnostic protocol.
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Name of submitter
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Kim Won-Bok
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DataSet
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Assemble type
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Assembled sequences (each sequence was assembled from two or more overlapping sequence reads)
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Submission type
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Single sequence
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Assembly date
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Assembly method
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Program version
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Assembly name
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Genome coverage
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Total raw read length
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Read throughput
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The number of contigs
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Contig length
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N50
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Sequencing technology
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Confirm full genome
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Description for subset of the genome
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Confirm final version
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Confirm de novo assembly
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Reference assembly name or accession
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Confirm update of existing submission
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Existing genome accession
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Molecule Type
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genomic DNA
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Topology
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Linear
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Source Organelle/Location information
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chromosomal
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Chimera check
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No
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Chimera check program name
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Chimera check program version
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Cultured or Uncultured
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Pure-cultured strains (axenic cultures containing only one microbial species each)
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Primer Type
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Forward primer name
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Forward primer sequence
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Reverse primer name
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Reverse primer sequence
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Coding region (CDS) / Gene / mRNA
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RNA
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Repeat sequence / mobile element / satellites
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Regulatory feature
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Others
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Reference file
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Release date
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2023-02-17
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Assembly state
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Confirm AGP file for unplaced scaffolds
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Confirm AGP file for unlocalized scaffolds
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How to assemble using AGP
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Confirm annotation in AGP
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Sequence file format
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Release date
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| File Name | Size | Type | Published | Download | |
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| CMC_F494.fasta | 2,019 2,019 | fasta | 2024-03-21 | ||
| CMC_F494.xlsx | 6,256 6,256 | xlsx | 2024-03-21 |